BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B05SP1|AL425809
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1677 1564 0.0
>3x_Contig1677
Length = 15081
Score = 1564 bits (789), Expect = 0.0
Identities = 798/800 (99%), Gaps = 1/800 (0%)
Strand = Plus / Plus
Query: 1 aacttcaagagaggtaaggagtatttgcttgagaatattgttagacaaaaatcaaacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6479 aacttcaagagaggtaaggagtatttgcttgagaatattgttagacaaaaatcaaacacc 6538
Query: 61 aacatccttggtggaaccactaatgcggaggttgacattcacattctattgaatgagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6539 aacatccttggtggaaccactaatgcggaggttgacattcacattctattgaatgagttg 6598
Query: 121 gaaaccgtcaagtacaatcagctggccattgctgaagatttgaagaggataactaaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6599 gaaaccgtcaagtacaatcagctggccattgctgaagatttgaagaggataactaaagat 6658
Query: 181 aatgaaatgttatggaaggagaatatgatggccagagaaagacaccaatcacaacaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6659 aatgaaatgttatggaaggagaatatgatggccagagaaagacaccaatcacaacaacaa 6718
Query: 241 gttctagaaaaactcctaaggtttttgtccagtgttttcggaccaaactctgcaaagacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6719 gttctagaaaaactcctaaggtttttgtccagtgttttcggaccaaactctgcaaagacc 6778
Query: 301 attggcaatgggttccaacctgatttgatccatgaactcagtgacatgcaagtgaaccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6779 attggcaatgggttccaacctgatttgatccatgaactcagtgacatgcaagtgaaccac 6838
Query: 361 atagagcaacaacaaccataacaataccggaaatataaaccccaacgcataccataacga 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6839 at-gagcaacaacaaccataacaataccggaaatataaaccccaacgcataccataacga 6897
Query: 421 aactgacgacccaatggccaacgtattcggtccattaaccccaacagaccagggcaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6898 aactgacgacccaatggccaacgtattcggtccattaaccccaacagaccagggcaaagt 6957
Query: 481 ccccttacaggattacaaactaagaccaaggctattgttaaagaacagatctatgtcgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6958 ccccttacaggattacaaactaagaccaaggctattgttaaagaacagatctatgtcgag 7017
Query: 541 ctcatcttcgtctaatctcaatcaaaggcagtngccacaaaataggattgtcggacaatc 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7018 ctcatcttcgtctaatctcaatcaaaggcagtcgccacaaaataggattgtcggacaatc 7077
Query: 601 acctccaccacagcagcaacaacaacaacaacaacaacaaggacaaccacaaggacaaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7078 acctccaccacagcagcaacaacaacaacaacaacaacaaggacaaccacaaggacaaca 7137
Query: 661 attctcgtatccaatccagggtggaaatcaaatgatgaaccaactggggagccctattgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7138 attctcgtatccaatccagggtggaaatcaaatgatgaaccaactggggagccctattgg 7197
Query: 721 aactcaagttggaagtccagttggaagtcaatacggtaaccagtatggaaaccaatacag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7198 aactcaagttggaagtccagttggaagtcaatacggtaaccagtatggaaaccaatacag 7257
Query: 781 taaccaattcggcaatcagt 800
||||||||||||||||||||
Sbjct: 7258 taaccaattcggcaatcagt 7277
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7281
Number of Sequences: 1807
Number of extensions: 7281
Number of successful extensions: 673
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)